Information for 3-GGGGACAGCGCAMAGG (Motif 8)

C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G
Reverse Opposite:
A G T C A G T C A G C T A C G T A C G T T A C G A G T C C T A G G A T C A C G T A T C G A G C T G T A C A T G C A G T C G A T C
p-value:1e-11
log p-value:-2.694e+01
Information Content per bp:1.743
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.9 +/- 21.6bp
Average Position of motif in Background41.9 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG---
-----TAGGGCAAAGGTCA
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG---
----AGAGTCCAAAGTCCA
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:GGGGACAGCGCAMAGG
----------CACAGN
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG
------ACATCAAAGG
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG
------ACWTCAAAGG
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG--
----GCCGCGCAGTGCGT
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG--
----AAAGATCAAAGGAA
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG
----AAAGATCAAAGG
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G
A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG--
------ACATCAAAGGNA
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGGGACAGCGCAMAGG---
---CANAGNNCAAAGTCCA
 C A T G A C T G A T C G A C T G C T G A A T G C G T C A C A T G A G T C A C T G A T G C C G T A T G C A C T G A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A