Information for 4-GAACAGCTTCTTT (Motif 5)

C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
Reverse Opposite:
C G T A C T G A G C T A A T C G G T C A C T G A C T A G A G T C A C G T A C T G A G C T A G C T G T A C
p-value:1e-13
log p-value:-3.027e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.7 +/- 24.0bp
Average Position of motif in Background15.3 +/- 3.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAACAGCTTCTTT
-AGCAGCTGCT--
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAACAGCTTCTTT
-AACAGCTGCAG-
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAACAGCTTCTTT
NGNGACAGCTGCN--
 A C G T A C G T C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAACAGCTTCTTT
-AACAGCTG----
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAACAGCTTCTTT
-GACAGCTGCAG-
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAACAGCTTCTTT
-AGCAGCTGCTNN
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAACAGCTTCTTT
BAACAGCTGT---
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAACAGCTTCTTT
NAACAGCTGG---
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAACAGCTTCTTT
-AACAGCTGTT--
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAACAGCTTCTTT
--NCAGCTGCTG-
 C A T G C T G A C T G A A G T C C G T A A C T G A G T C A G C T A C G T A T G C C A G T A G C T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T