Information for 12-GCTGAGAAACGAA (Motif 19)

A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.897e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.5 +/- 7.1bp
Average Position of motif in Background70.5 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCTGAGAAACGAA---
----AGAAACGAAAGT
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTGAGAAACGAA----
---GAGAACCGAAACTG
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTGAGAAACGAA
CCGCATAGCAACGGA
 A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTGAGAAACGAA-----
-NNTAAAAACGATGTTNT
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTGAGAAACGAA-----
---CAAAATCGAAACTAA
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGAAACGAA
TGCTGACTCA----
 A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTGAGAAACGAA
CSTGGGAAAD---
 A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCTGAGAAACGAA
HTGCTGAGTCAT---
 A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGAAACGAA
CCTGCTGAGH------
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAGAAACGAA
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C T G C G T A C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T