Information for 8-TMCGMTTCCCAGA (Motif 9)

A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A
Reverse Opposite:
A C G T A T G C A C G T C T A G C T A G A C T G C G T A C G T A C A G T A G T C A C T G C A T G G T C A
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.722
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif120.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets41.5 +/- 21.3bp
Average Position of motif in Background52.4 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TMCGMTTCCCAGA----
AACTACAATTCCCAGAATGC
 A C G T A C G T A C G T A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:TMCGMTTCCCAGA--
----TTTCCCAGAAN
 A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TMCGMTTCCCAGA-
---ATTTCCAAGAA
 A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TMCGMTTCCCAGA----
RACTACAACTCCCAGVAKGC
 A C G T A C G T A C G T A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TMCGMTTCCCAGA
ACTACAATTCCC---
 A C G T A C G T A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TMCGMTTCCCAGA
---HTTTCCCASG
 A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TMCGMTTCCCAGA--
-----TGCCCAGNHW
 A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TMCGMTTCCCAGA--
----TTTCCTGGAAA
 A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TMCGMTTCCCAGA--
-NNNTTTCCTGGAAA
 A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T A C G T
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TMCGMTTCCCAGA-----
---ATTTCCCAGVAKSCY
 A C G T G T A C G T A C T C A G G T C A G C A T G C A T G T A C A G T C A G T C G T C A A T C G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C