Information for 6-CTCTAGGCGCCGC (Motif 6)

A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C T A C G A C T G A G T C A C T G A T G C A G T C A C G T C T G A A C T G C G T A A C T G
p-value:1e-12
log p-value:-2.962e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 30.6bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGGCGCCGC---
NNNNTTGGCGCCGANNN
 A C G T A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGGCGCCGC---
NNNNTTGGCGCCGANNN
 A C G T A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAGGCGCCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCTAGGCGCCGC---
-CAAAGGCGTGGCCAG
 A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCTAGGCGCCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTCTAGGCGCCGC
-----GGCGCGCT
 A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCTAGGCGCCGC-
--TTTGGCGCCAAA
 A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C A C G T
A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGGCGCCGC
TGTCTAGACG----
 A C G T A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGGCGCCGC-
NNTTTANNCGACGNA
 A C G T A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGGCGCCGC
NNGCNCTGCGCGGC
 A C G T A G T C C G A T A G T C A G C T C G T A A C T G A T C G A G T C A C T G A G T C A G T C A C T G A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C