Information for 18-CATAGAGAGGAGC (Motif 21)

A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C A C G T A G T C A C G T A G T C A C G T C G T A A C G T A C T G
p-value:1e-8
log p-value:-1.854e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 7.8bp
Average Position of motif in Background56.3 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATAGAGAGGAGC--
-GGAGAAAGGTGCGA
 A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CATAGAGAGGAGC-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CATAGAGAGGAGC
-------CGGAGC
 A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATAGAGAGGAGC
-BTBRAGTGSN--
 A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CATAGAGAGGAGC-
----GGGAGGACNG
 A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CATAGAGAGGAGC
-----AGAGGAA-
 A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CATAGAGAGGAGC
TTGACCGAGAATTCC
 A C G T A C G T A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CATAGAGAGGAGC
-RGKGGGCGGAGC
 A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CATAGAGAGGAGC-
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CATAGAGAGGAGC
--TTGAGTGSTT-
 A G T C C G T A A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G C G T A A C T G A G T C
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T