Information for 6-CTTTCYCAKAAKGARG (Motif 8)

A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
Reverse Opposite:
A G T C G A C T C G A T A G T C G T A C A C G T C A G T G T A C A C G T A C T G C T G A A C T G C T G A G T C A C G T A T A C G
p-value:1e-13
log p-value:-3.200e+01
Information Content per bp:1.751
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.3 +/- 21.2bp
Average Position of motif in Background45.9 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTTCYCAKAAKGARG
-TTTCCCAGAAN----
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTTTCYCAKAAKGARG
----CACAGCAGGGGG
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTTCYCAKAAKGARG
ATTTCCAAGAA-----
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTTCYCAKAAKGARG
NNNTTTCCTGGAAA----
 A C G T A C G T A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTTCYCAKAAKGARG
NTTTCTNAGAAA----
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTCYCAKAAKGARG
-CCACACAGCAGGAGA
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTTCYCAKAAKGARG--
---DCHCAGCAGGRGGCC
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTTCYCAKAAKGARG
-TTTCCTGGAAA----
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTTCYCAKAAKGARG
-CCACACAGCAGGAGA
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTTCYCAKAAKGARG
-TTCCKNAGAA-----
 A T G C G C A T A C G T A G C T G T A C A G C T A G T C C G T A A C T G G C T A C G T A C A T G A C T G C G T A C T G A A C T G
A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T