Information for 5-GGTGGTGACCTGCCAG (Motif 7)

A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A T C G A T G C C G T A A C T G A T C G A G C T A T G C C G T A A G T C A G T C T G C A A G T C T A G C
p-value:1e-13
log p-value:-3.200e+01
Information Content per bp:1.781
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.9 +/- 21.6bp
Average Position of motif in Background66.0 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
--TGGCAGNCTGCCAG
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

CREB3L1/MA0839.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
--TGATGACGTGGCAN
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGTGGTGACCTGCCAG
-----CCAACTGCCA-
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

CREB3/MA0638.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
--NGATGACGTGGCAN
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
---GGTCACGTGGC--
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGTGGTGACCTGCCAG-
-------VGCTGWCAVB
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
--------CTTGGCAA
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PKNOX1/MA0782.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
---TGACACCTGTCA-
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
---TGACACCTGTCA-
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGTGGTGACCTGCCAG
----GTGACCTT----
 A C T G A C T G A C G T A C T G A C T G C G A T A T C G C T G A T A G C A G T C A C G T A T C G T A G C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T