Information for 11-AGCGAAGCAGAGA (Motif 17)

C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T A T C G A G T C A C G T A C G T A G T C A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.2 +/- 20.5bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCGAAGCAGAGA
--NGAAGC-----
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGCGAAGCAGAGA--
AACGAAACCGAAACT
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCGAAGCAGAGA
AGGGTAACAGC--
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGCGAAGCAGAGA---
------GCAGTGATTT
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGCGAAGCAGAGA--
---GAAACTGAAACT
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAAGCAGAGA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGCGAAGCAGAGA
ANAGATAAGAA----
 A C G T A C G T C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGCGAAGCAGAGA--
---GAAAGTGAAAGT
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGCGAAGCAGAGA-----
--CGAAGCACACAAAATA
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AGCGAAGCAGAGA--
-TCGAAACCGAAACT
 C G T A A C T G T A G C A C T G C G T A C G T A A C T G A T G C C G T A A C T G C G T A A C T G C G T A A C G T A C G T
A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T