Information for 10-GAACAAAASAAGC (Motif 15)

A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
Reverse Opposite:
C A T G A G T C A G C T A C G T T A C G A G C T A C G T A C G T A C G T A T C G A C G T A G C T A T G C
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 16.6bp
Average Position of motif in Background40.0 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GAACAAAASAAGC--
AACACCAAAACAAAGGA
 A C G T A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAACAAAASAAGC--
ATATCAAAACAAAACA
 A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GAACAAAASAAGC
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GAACAAAASAAGC
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAAASAAGC
AAAACAAAGG----
 A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAACAAAASAAGC
-AAACAAACATTC
 A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAAASAAGC
GGAACAAAGR----
 A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAACAAAASAAGC
TTTAGAACAATAAAAT-
 A C G T A C G T A C G T A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAACAAAASAAGC
-AACAAT------
 A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAACAAAASAAGC
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A T C G C T G A G T C A A T G C C G T A C G T A C G T A C T G A A T G C C G T A C T G A C T A G G A T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A