Information for 11-CTGACCGCGC (Motif 14)

A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C A T C G A C T G G C A T A G T C C G T A A T C G
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.844
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif95.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets48.0 +/- 26.1bp
Average Position of motif in Background51.7 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTGACCGCGC-
---AGCGCGCC
 A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCGCGC---
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCGCGC---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGACCGCGC
-TGACCYCT-
 A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTGACCGCGC-------
---GCCGCGCAGTGCGT
 A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Klf12/MA0742.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTGACCGCGC-------
--GACCACGCCCTTATT
 A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTGACCGCGC---
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGACCGCGC------
TCGACCCCGCCCCTAT
 A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGACCGCGC---
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGACCGCGC---
TCCGCCCCCGCATT
 A C G T A T G C G C A T C T A G C G T A A G T C A T G C T A C G G T A C A C T G A G T C A C G T A C G T A C G T
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T