Information for 7-TGGCAGGCACCACAGC (Motif 12)

A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A C T G A T C G C G A T A C T G A G T C A G T C A C G T A C T G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.8 +/- 10.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGGCAGGCACCACAGC
------AAACCACAGC
 A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TGGCAGGCACCACAGC-
------AAACCACAGAN
 A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGGCAGGCACCACAGC-
-----NWAACCACADNN
 A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGGCAGGCACCACAGC
-----NAAACCACAG-
 A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGGCACCACAGC
TTGACAGC---------
 A C G T A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:TGGCAGGCACCACAGC
----------CACAGN
 A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGGCACCACAGC
CTTGGCAA----------
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGGCACCACAGC
VBTGWCAGCB--------
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGGCACCACAGC
TTGACAGG---------
 A C G T A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGGCAGGCACCACAGC
------AAACCACANN
 A C G T A C T G C T A G A G T C C G T A A C T G C T A G T A G C C G T A A T G C A G T C C G T A A G T C G T C A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A