Information for 1-TRACCACAAA (Motif 1)

G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A
Reverse Opposite:
A C G T A G C T A C G T A C T G A G C T A C T G A C T G A G C T A G T C C G T A
p-value:1e-70
log p-value:-1.612e+02
Information Content per bp:1.754
Number of Target Sequences with motif174.0
Percentage of Target Sequences with motif20.69%
Number of Background Sequences with motif1916.2
Percentage of Background Sequences with motif4.01%
Average Position of motif in Targets49.5 +/- 22.6bp
Average Position of motif in Background50.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TRACCACAAA
AAACCGCAAA
 G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-TRACCACAAA-
NWAACCACADNN
 A C G T G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-TRACCACAAA
NAAACCACAG-
 A C G T G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TRACCACAAA-
AAACCACAGAN
 G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TRACCACAAA
AAACCACANN
 G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TRACCACAAA
AAACCACAGC
 G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.90
Offset:0
Orientation:forward strand
Alignment:TRACCACAAA
AAACCGCAA-
 G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TRACCACAAA-
GCGACCACACTG
 A C G T G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TRACCACAAA-
GCGACCACCGAA
 A C G T G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TRACCACAAA
-ATCCAC---
 G C A T C T A G C T G A A G T C A G T C C T G A A G T C C G T A T C G A T G C A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T