Information for 1-CCGCCAGRGGGCGCCC (Motif 2)

G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C
Reverse Opposite:
A T C G T A C G A C T G G T A C A C T G A G T C A G T C G T A C G A C T A G T C A C G T C T A G A T C G A G T C C T A G A C T G
p-value:1e-17
log p-value:-3.917e+01
Information Content per bp:1.758
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif94.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets44.0 +/- 23.8bp
Average Position of motif in Background46.5 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCAGRGGGCGCCC---
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CCGCCAGRGGGCGCCC
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCAGRGGGCGCCC-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CCGCCAGRGGGCGCCC----
----TTGGGGGCGCCCCTAG
 G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGCCAGRGGGCGCCC
CCGCCCAAGGGCAG--
 G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGCCAGRGGGCGCCC
-TGTCAGGGGGCG---
 G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGCCAGRGGGCGCCC
-TGCCCNGGGGCA---
 G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCGCCAGRGGGCGCCC---
----ATAAGGGCGCGCGAT
 G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:CCGCCAGRGGGCGCCC-
---------GGCGCGCT
 G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGCCAGRGGGCGCCC--
-NNNAAGGGGGCGGGNNN
 G T A C A G T C C T A G A T G C G A T C G T C A A C T G C T G A A C T G T A C G A C T G G T A C A C T G A G T C A T G C T A G C A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C