Information for 13-ACCGAGCTAACCA (Motif 19)

C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A T G C A C T G A C T G A C G T
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 15.4bp
Average Position of motif in Background40.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACCGAGCTAACCA-
---NNACTTACCTN
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ACCGAGCTAACCA---
------NAAACCACAG
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

DUXA/MA0884.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACCGAGCTAACCA-
-CTAATTTAATCAA
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T
A C G T G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACCGAGCTAACCA----
ACTTAGTTAACTAAAAA
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACCGAGCTAACCA------
--CGACCCAATCAACGGTG
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:ACCGAGCTAACCA--
-----GTTAACTAGN
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:ACCGAGCTAACCA----
-------AAACCACAGC
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:ACCGAGCTAACCA-----
------NWAACCACADNN
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:ACCGAGCTAACCA----
-------AAACCACANN
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ACCGAGCTAACCA------
--GANGTTAACTAGTTTNN
 C G T A A G T C A G T C A T C G C G T A A C T G A G T C A C G T T C G A C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C