Information for 3-CGGAAACCGC (Motif 12)

T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C
Reverse Opposite:
A C T G A G T C A C T G A T C G A G C T A G C T C G A T A T G C G T A C A T C G
p-value:1e-10
log p-value:-2.410e+01
Information Content per bp:1.655
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif12.80%
Number of Background Sequences with motif3304.5
Percentage of Background Sequences with motif6.86%
Average Position of motif in Targets51.4 +/- 27.2bp
Average Position of motif in Background49.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGGAAACCGC
ACTGAAACCA-
 A C G T T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CGGAAACCGC--
---AAACCGCAA
 T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C A C G T A C G T
A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACCGC
RCCGGAARYN--
 A C G T A C G T T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACCGC
DCCGGAARYN--
 A C G T A C G T T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CGGAAACCGC---
---AAACCGCAAA
 T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGAAACCGC-
-GGAAANCCCC
 T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CGGAAACCGC
GAGAACCGAAACTG-
 A C G T A C G T A C G T A C G T A C G T T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGAAACCGC-
-GGAAATTCCC
 T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACCGC
NNTGGAAANN--
 A C G T A C G T T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACCGC
RCCGGAAGTD--
 A C G T A C G T T A G C A C T G T A C G G C T A T C G A T C G A T A G C G T A C T C A G T G A C
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T