Information for 9-CMCTGTGGTGAAGTGG (Motif 8)

T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G
Reverse Opposite:
A G T C A G T C C G T A A G T C G C A T G A C T G T A C G T C A T A G C A G T C G C T A G T A C C G T A A C T G C A G T A C T G
p-value:1e-12
log p-value:-2.861e+01
Information Content per bp:1.677
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif111.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets46.1 +/- 19.7bp
Average Position of motif in Background52.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CMCTGTGGTGAAGTGG
-GCTGTGGTTT-----
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:CMCTGTGGTGAAGTGG-
-------NTCAAGTGGN
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CMCTGTGGTGAAGTGG-----
----NTNNTTAAGTGGNTNAN
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CMCTGTGGTGAAGTGG
NNHTGTGGTTWN----
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CMCTGTGGTGAAGTGG-----
----NTNNTTAAGTGGTTANN
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CMCTGTGGTGAAGTGG
--CTGTGGTTTN----
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CMCTGTGGTGAAGTGG
GTCTGTGGTTT-----
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CMCTGTGGTGAAGTGG
-------NTCAAGTGG
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CMCTGTGGTGAAGTGG-
--------TTAAGTGGT
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CMCTGTGGTGAAGTGG-
-------BTBRAGTGSN
 T G A C G T C A A G T C C G A T A C T G C A G T A C T G A T C G C A G T A C T G C G T A C G T A C T A G C G A T T A C G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C