Information for 5-RCCACCAGCTGCT (Motif 6)

C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A C T A G A G T C C G T A A C T G G A T C A C G T A C T G A T C G A C G T A C T G A C T G A G C T
p-value:1e-13
log p-value:-3.086e+01
Information Content per bp:1.823
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif20.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.5 +/- 30.2bp
Average Position of motif in Background57.0 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:RCCACCAGCTGCT
---AGCAGCTGCT
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:RCCACCAGCTGCT----
CTCAGCAGCTGCTACTG
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:RCCACCAGCTGCT
--NNGCAGCTGTT
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:RCCACCAGCTGCT
--NNGCAGCTGTC
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:RCCACCAGCTGCT
--CAGCAGCTGN-
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:RCCACCAGCTGCT
-NNAGCAGCTGCT
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:7
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:RCCACCAGCTGCT-
----CCAGCTGTTN
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

MSC/MA0665.1/Jaspar

Match Rank:8
Score:0.75
Offset:3
Orientation:forward strand
Alignment:RCCACCAGCTGCT
---AACAGCTGTT
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:RCCACCAGCTGCT
-CGACCATCTGTT
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.74
Offset:3
Orientation:forward strand
Alignment:RCCACCAGCTGCT
---AACAGCTGAT
 C T G A A G T C A G T C G T C A T A G C G T A C C G T A C T A G A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T