Information for 17-AACGTGTAAG (Motif 40)

G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A G T C C G T A A G T C C T A G A G C T A C G T
p-value:1e-5
log p-value:-1.315e+01
Information Content per bp:1.883
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif52.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets47.6 +/- 24.3bp
Average Position of motif in Background55.1 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt/MA0004.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACGTGTAAG
CACGTG----
 G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AACGTGTAAG
GGCACGTGTC--
 A C G T A C G T G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AACGTGTAAG
GCACGTGT---
 A C G T G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AACGTGTAAG
-AGGTGTGA-
 G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AACGTGTAAG
CACGTGBN--
 G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AACGTGTAAG
AACACGTGTT--
 A C G T A C G T G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACGTGTAAG
-AGGTGTGA-
 G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AACGTGTAAG-
AAGGTGTGAAA
 G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:9
Score:0.64
Offset:-9
Orientation:reverse strand
Alignment:---------AACGTGTAAG----
ACCGCCNTCCACGTGTANNGACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACGTGTAAG
-AGGTGTGA-
 G T C A C T G A A G T C A C T G A C G T A C T G C G A T G T C A C G T A A C T G
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T