Information for 17-CTGTGGCTKCTCTSTG (Motif 20)

A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
Reverse Opposite:
G T A C C G T A T A C G C G T A A C T G C G T A C T A G G T A C C G T A A C T G A G T C A T G C C G T A A T G C G T C A A C T G
p-value:1e-9
log p-value:-2.225e+01
Information Content per bp:1.797
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 20.7bp
Average Position of motif in Background23.0 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGCTKCTCTSTG
GTCTGTGGTTT-------
 A C G T A C G T A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCTKCTCTSTG
GCTGTG-----------
 A C G T A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGCTKCTCTSTG
NNTGTGGTTT-------
 A C G T A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGCTKCTCTSTG
GCTGTGGTTT-------
 A C G T A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTGTGGCTKCTCTSTG
----TTCTTATCTGT-
 A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGTGGCTKCTCTSTG
CTGTGGTTTN------
 A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CTGTGGCTKCTCTSTG
-----TCTTATCTCCC
 A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTGTGGCTKCTCTSTG
----NCCTTATCTG--
 A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGCTKCTCTSTG
NNHTGTGGTTWN------
 A C G T A C G T A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGTGGCTKCTCTSTG
CTGTTCCTGG------
 A G T C A C G T A T C G A C G T A T C G T A C G A G T C A C G T C A G T A G T C C G A T A G T C A C G T A T C G A C G T A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T