Information for 14-CAGRAAGCTTTGTGVA (Motif 13)

A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
Reverse Opposite:
A C G T A C G T A G T C G T C A T G A C C T G A G T C A C G T A T C A G G A T C A C G T C A G T A G C T A G T C A C G T C T A G
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.716
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.7 +/- 28.1bp
Average Position of motif in Background50.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGRAAGCTTTGTGVA
---CAAGCTT------
 A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGRAAGCTTTGTGVA
-AGGVNCCTTTGT---
 A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGRAAGCTTTGTGVA
---GAANGTTCTAGAA
 A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
A C G T A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAGRAAGCTTTGTGVA
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGRAAGCTTTGTGVA
-TAGAANVTTCTAGAA
 A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGRAAGCTTTGTGVA
---GAACGTTCTAGAA
 A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGRAAGCTTTGTGVA
---GAANNTTCTAGAA
 A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAGRAAGCTTTGTGVA----
-----ANATTTTTGCAANTN
 A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGRAAGCTTTGTGVA
AACAGGAAGT--------
 A C G T A C G T A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAGRAAGCTTTGTGVA
ACAGGAAGTG-------
 A C G T A G T C C G T A T C A G T C G A G C T A T G C A C A T G A G T C A C G T A C G T A G C T A C T G C A G T A C T G T G C A C G T A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T