Information for 3-GGCCTCCCTCNGWGGC (Motif 3)

C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
Reverse Opposite:
C A T G A G T C A G T C C G A T A T G C A C G T T A C G C T G A A T C G A C T G A T C G C T G A C T A G A T C G A G T C G T A C
p-value:1e-16
log p-value:-3.742e+01
Information Content per bp:1.752
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.4 +/- 20.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTCCCTCNGWGGC
CNAGGCCT-----------
 A C G T A C G T A C G T C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCCTCCCTCNGWGGC
GACCCCCCGCTGTGC-
 C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCCTCCCTCNGWGGC
GACCCCCCGCTGTG--
 C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCTCCCTCNGWGGC
AGGCCTAG---------
 A C G T C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTCCCTCNGWGGC
GGGGCCGAGGCCTG----------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCTCCCTCNGWGGC
CNGTCCTCCC--------
 A C G T A C G T C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGCCTCCCTCNGWGGC-
----TGCCCTGAGGGCA
 C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCCTCCCTCNGWGGC
GACCCCCCGCTGCGC-
 C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCCTCCCTCNGWGGC-
----TGCCCTGAGGGCA
 C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCCTCCCTCNGWGGC-
----TGCCCTGAGGGCA
 C A T G C T A G A T G C A G T C A G C T A T G C A G T C A T G C G A C T A T G C C G T A A T C G C G T A A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A