Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 795)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 48247)	% of Background Sequences with Motif
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-51	-1.178e+02	0.0000	166.0	20.88%	2557.1	5.30%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-50	-1.154e+02	0.0000	136.0	17.11%	1740.1	3.60%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-39	-9.187e+01	0.0000	198.0	24.91%	4285.1	8.88%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-39	-8.988e+01	0.0000	150.0	18.87%	2648.8	5.49%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-37	-8.710e+01	0.0000	126.0	15.85%	1956.5	4.05%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-37	-8.529e+01	0.0000	51.0	6.42%	252.8	0.52%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-34	-8.050e+01	0.0000	152.0	19.12%	2950.4	6.11%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-33	-7.774e+01	0.0000	58.0	7.30%	412.2	0.85%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-33	-7.744e+01	0.0000	112.0	14.09%	1731.4	3.59%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-32	-7.568e+01	0.0000	130.0	16.35%	2332.4	4.83%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-31	-7.327e+01	0.0000	164.0	20.63%	3591.1	7.44%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-31	-7.166e+01	0.0000	153.0	19.25%	3236.0	6.70%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-25	-5.879e+01	0.0000	117.0	14.72%	2334.2	4.83%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-24	-5.630e+01	0.0000	94.0	11.82%	1635.6	3.39%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-24	-5.556e+01	0.0000	79.0	9.94%	1196.5	2.48%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-22	-5.077e+01	0.0000	92.0	11.57%	1706.3	3.53%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-21	-5.063e+01	0.0000	82.0	10.31%	1390.5	2.88%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-18	-4.342e+01	0.0000	54.0	6.79%	722.7	1.50%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-17	-3.963e+01	0.0000	84.0	10.57%	1744.2	3.61%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-14	-3.382e+01	0.0000	67.0	8.43%	1329.1	2.75%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-14	-3.268e+01	0.0000	41.0	5.16%	559.0	1.16%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-12	-2.904e+01	0.0000	47.0	5.91%	804.0	1.67%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-11	-2.762e+01	0.0000	25.0	3.14%	241.9	0.50%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-8	-2.043e+01	0.0000	58.0	7.30%	1455.2	3.01%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-7	-1.655e+01	0.0000	55.0	6.92%	1506.7	3.12%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-6	-1.576e+01	0.0000	77.0	9.69%	2490.1	5.16%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-6	-1.499e+01	0.0000	27.0	3.40%	520.1	1.08%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-6	-1.498e+01	0.0000	34.0	4.28%	762.2	1.58%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-5	-1.377e+01	0.0000	36.0	4.53%	880.5	1.82%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-5	-1.370e+01	0.0000	41.0	5.16%	1076.8	2.23%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-5	-1.302e+01	0.0000	44.0	5.53%	1228.6	2.54%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-5	-1.232e+01	0.0001	87.0	10.94%	3206.3	6.64%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-4	-1.125e+01	0.0001	37.0	4.65%	1029.8	2.13%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-4	-1.113e+01	0.0002	33.0	4.15%	874.8	1.81%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-4	-1.098e+01	0.0002	17.0	2.14%	302.1	0.63%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-4	-9.570e+00	0.0007	18.0	2.26%	373.2	0.77%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-3	-8.090e+00	0.0030	12.0	1.51%	215.9	0.45%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-3	-7.475e+00	0.0054	39.0	4.91%	1338.6	2.77%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-2	-6.790e+00	0.0105	15.0	1.89%	358.8	0.74%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-2	-6.272e+00	0.0172	101.0	12.70%	4591.5	9.51%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-2	-6.240e+00	0.0173	6.0	0.75%	77.0	0.16%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-2	-6.041e+00	0.0206	34.0	4.28%	1215.5	2.52%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-2	-5.700e+00	0.0283	6.0	0.75%	86.1	0.18%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-2	-5.242e+00	0.0437	18.0	2.26%	549.1	1.14%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-2	-5.235e+00	0.0437	20.0	2.52%	636.8	1.32%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-2	-5.202e+00	0.0437	33.0	4.15%	1237.0	2.56%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-2	-5.024e+00	0.0510	19.0	2.39%	605.8	1.25%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-2	-4.857e+00	0.0589	10.0	1.26%	242.2	0.50%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-2	-4.713e+00	0.0667	47.0	5.91%	1980.6	4.10%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-1	-4.605e+00	0.0728	249.0	31.32%	13293.9	27.53%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-1	-4.595e+00	0.0728	10.0	1.26%	252.7	0.52%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-4.485e+00	0.0790	25.0	3.14%	917.9	1.90%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-1	-4.103e+00	0.1135	60.0	7.55%	2739.8	5.67%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-4.021e+00	0.1209	29.0	3.65%	1152.5	2.39%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e-1	-3.974e+00	0.1245	13.0	1.64%	405.7	0.84%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-3.864e+00	0.1363	93.0	11.70%	4573.1	9.47%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-1	-3.843e+00	0.1368	8.0	1.01%	204.6	0.42%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-1	-3.823e+00	0.1372	19.0	2.39%	687.2	1.42%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-3.736e+00	0.1471	30.0	3.77%	1231.5	2.55%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-1	-3.714e+00	0.1479	20.0	2.52%	743.7	1.54%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-3.660e+00	0.1536	138.0	17.36%	7147.6	14.80%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-1	-3.654e+00	0.1536	2.0	0.25%	15.7	0.03%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-1	-3.562e+00	0.1639	7.0	0.88%	176.5	0.37%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-1	-3.557e+00	0.1639	36.0	4.53%	1557.1	3.23%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-1	-3.541e+00	0.1639	59.0	7.42%	2775.5	5.75%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-1	-3.497e+00	0.1671	12.0	1.51%	389.8	0.81%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-3.454e+00	0.1718	14.0	1.76%	482.5	1.00%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-1	-3.375e+00	0.1832	43.0	5.41%	1947.3	4.03%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-3.290e+00	0.1965	10.0	1.26%	313.3	0.65%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-3.244e+00	0.2028	78.0	9.81%	3870.2	8.02%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-1	-3.206e+00	0.2076	29.0	3.65%	1240.7	2.57%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e-1	-3.193e+00	0.2076	7.0	0.88%	191.4	0.40%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-1	-3.172e+00	0.2090	35.0	4.40%	1555.8	3.22%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-3.144e+00	0.2121	16.0	2.01%	599.8	1.24%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-1	-3.132e+00	0.2121	2.0	0.25%	20.1	0.04%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-3.070e+00	0.2222	91.0	11.45%	4634.7	9.60%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-3.062e+00	0.2222	28.0	3.52%	1206.8	2.50%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-1	-3.048e+00	0.2222	5.0	0.63%	118.9	0.25%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-1	-3.047e+00	0.2222	12.0	1.51%	418.1	0.87%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e-1	-3.032e+00	0.2222	1.0	0.13%	3.8	0.01%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.959e+00	0.2331	13.0	1.64%	471.4	0.98%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-2.927e+00	0.2377	32.0	4.03%	1431.6	2.97%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-1	-2.908e+00	0.2394	16.0	2.01%	619.8	1.28%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-2.798e+00	0.2640	11.0	1.38%	389.2	0.81%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e-1	-2.753e+00	0.2730	1.0	0.13%	4.7	0.01%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-1	-2.698e+00	0.2851	4.0	0.50%	92.1	0.19%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-1	-2.681e+00	0.2866	34.0	4.28%	1572.5	3.26%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-1	-2.631e+00	0.2977	7.0	0.88%	218.0	0.45%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-1	-2.604e+00	0.3026	90.0	11.32%	4694.0	9.72%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e-1	-2.537e+00	0.3201	17.0	2.14%	704.9	1.46%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e-1	-2.364e+00	0.3763	9.0	1.13%	326.9	0.68%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-2.348e+00	0.3782	76.0	9.56%	3966.0	8.21%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-2.333e+00	0.3796	36.0	4.53%	1736.3	3.60%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-2.326e+00	0.3796	26.0	3.27%	1198.8	2.48%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.323e+00	0.3796	34.0	4.28%	1629.5	3.38%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-2.300e+00	0.3802	5.0	0.63%	148.9	0.31%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-2.292e+00	0.3802	16.0	2.01%	679.1	1.41%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.277e+00	0.3809	17.0	2.14%	733.0	1.52%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-2.271e+00	0.3809	92.0	11.57%	4899.4	10.15%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-2.243e+00	0.3862	72.0	9.06%	3765.7	7.80%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-2.231e+00	0.3871	73.0	9.18%	3825.5	7.92%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-2.173e+00	0.4060	10.0	1.26%	389.6	0.81%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.154e+00	0.4102	32.0	4.03%	1550.0	3.21%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-2.143e+00	0.4104	3.0	0.38%	72.9	0.15%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-2.134e+00	0.4105	18.0	2.26%	801.1	1.66%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-2.097e+00	0.4217	42.0	5.28%	2111.8	4.37%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-2.062e+00	0.4327	50.0	6.29%	2566.3	5.32%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.034e+00	0.4409	13.0	1.64%	553.2	1.15%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-2.025e+00	0.4409	5.0	0.63%	162.7	0.34%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-2.022e+00	0.4409	52.0	6.54%	2688.4	5.57%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-2.021e+00	0.4409	4.0	0.50%	118.2	0.24%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-2.015e+00	0.4409	83.0	10.44%	4458.9	9.24%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.012e+00	0.4409	74.0	9.31%	3942.6	8.17%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.009e+00	0.4409	24.0	3.02%	1138.3	2.36%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.959e+00	0.4461	13.0	1.64%	561.6	1.16%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-1.954e+00	0.4461	25.0	3.14%	1201.3	2.49%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.916e+00	0.4581	90.0	11.32%	4893.7	10.14%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.907e+00	0.4582	75.0	9.43%	4030.3	8.35%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.902e+00	0.4582	8.0	1.01%	313.6	0.65%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.876e+00	0.4649	68.0	8.55%	3637.8	7.53%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.874e+00	0.4649	11.0	1.38%	467.9	0.97%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.855e+00	0.4668	9.0	1.13%	367.4	0.76%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.837e+00	0.4715	65.0	8.18%	3476.5	7.20%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-1.819e+00	0.4762	144.0	18.11%	8085.9	16.75%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.818e+00	0.4762	23.0	2.89%	1114.7	2.31%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.818e+00	0.4762	3.0	0.38%	84.1	0.17%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-1.798e+00	0.4762	1.0	0.13%	11.2	0.02%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.770e+00	0.4845	25.0	3.14%	1232.8	2.55%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.767e+00	0.4845	91.0	11.45%	5001.9	10.36%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.760e+00	0.4845	11.0	1.38%	479.9	0.99%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.753e+00	0.4845	99.0	12.45%	5472.2	11.33%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.735e+00	0.4862	7.0	0.88%	277.7	0.58%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.724e+00	0.4881	3.0	0.38%	88.1	0.18%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-1.699e+00	0.4965	21.0	2.64%	1024.9	2.12%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.697e+00	0.4965	19.0	2.39%	915.7	1.90%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.635e+00	0.5218	30.0	3.77%	1537.0	3.18%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.618e+00	0.5270	22.0	2.77%	1093.9	2.27%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.600e+00	0.5326	6.0	0.75%	238.7	0.49%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.529e+00	0.5675	87.0	10.94%	4853.6	10.05%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.526e+00	0.5675	72.0	9.06%	3978.1	8.24%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.507e+00	0.5722	23.0	2.89%	1169.2	2.42%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.499e+00	0.5724	40.0	5.03%	2135.5	4.42%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-1.496e+00	0.5724	33.0	4.15%	1736.4	3.60%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.482e+00	0.5743	47.0	5.91%	2542.2	5.27%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.482e+00	0.5743	20.0	2.52%	1006.2	2.08%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.434e+00	0.5945	43.0	5.41%	2325.8	4.82%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.431e+00	0.5945	11.0	1.38%	518.9	1.07%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.411e+00	0.5998	29.0	3.65%	1528.7	3.17%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.372e+00	0.6198	14.0	1.76%	691.9	1.43%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.365e+00	0.6198	17.0	2.14%	859.7	1.78%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-1.360e+00	0.6198	1.0	0.13%	18.8	0.04%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.354e+00	0.6198	70.0	8.81%	3923.0	8.13%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.337e+00	0.6249	6.0	0.75%	262.0	0.54%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.327e+00	0.6269	7.0	0.88%	315.6	0.65%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.318e+00	0.6288	69.0	8.68%	3877.9	8.03%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.316e+00	0.6288	28.0	3.52%	1493.7	3.09%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-1.313e+00	0.6288	47.0	5.91%	2592.1	5.37%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.311e+00	0.6288	5.0	0.63%	211.7	0.44%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.306e+00	0.6288	6.0	0.75%	264.4	0.55%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.265e+00	0.6423	121.0	15.22%	6976.9	14.45%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-1.257e+00	0.6434	22.0	2.77%	1163.1	2.41%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.245e+00	0.6471	67.0	8.43%	3787.0	7.84%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.226e+00	0.6551	32.0	4.03%	1747.0	3.62%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.217e+00	0.6572	64.0	8.05%	3621.6	7.50%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.202e+00	0.6629	4.0	0.50%	168.3	0.35%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.198e+00	0.6629	27.0	3.40%	1464.5	3.03%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.191e+00	0.6629	1.0	0.13%	22.9	0.05%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.178e+00	0.6672	29.0	3.65%	1585.5	3.28%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.158e+00	0.6766	22.0	2.77%	1185.5	2.46%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.156e+00	0.6766	37.0	4.65%	2057.7	4.26%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.137e+00	0.6825	10.0	1.26%	504.3	1.04%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.134e+00	0.6825	6.0	0.75%	282.1	0.58%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.100e+00	0.7002	5.0	0.63%	231.2	0.48%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.100e+00	0.7002	19.0	2.39%	1025.8	2.12%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-1.084e+00	0.7034	2.0	0.25%	73.3	0.15%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.076e+00	0.7049	60.0	7.55%	3441.0	7.13%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-1.074e+00	0.7049	6.0	0.75%	289.5	0.60%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.073e+00	0.7049	8.0	1.01%	401.1	0.83%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.071e+00	0.7049	24.0	3.02%	1322.7	2.74%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.068e+00	0.7049	3.0	0.38%	126.4	0.26%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.065e+00	0.7049	48.0	6.04%	2734.4	5.66%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.062e+00	0.7049	31.0	3.90%	1734.9	3.59%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-1.049e+00	0.7049	6.0	0.75%	293.0	0.61%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-1.037e+00	0.7049	32.0	4.03%	1800.6	3.73%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.021e+00	0.7086	164.0	20.63%	9689.1	20.07%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.019e+00	0.7086	92.0	11.57%	5372.4	11.13%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-9.878e-01	0.7249	19.0	2.39%	1051.1	2.18%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-9.856e-01	0.7249	23.0	2.89%	1286.9	2.67%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-9.549e-01	0.7412	32.0	4.03%	1826.8	3.78%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-9.454e-01	0.7444	25.0	3.14%	1415.3	2.93%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-9.347e-01	0.7484	7.0	0.88%	364.7	0.76%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-9.203e-01	0.7553	43.0	5.41%	2492.7	5.16%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-8.932e-01	0.7720	50.0	6.29%	2921.9	6.05%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-8.856e-01	0.7739	9.0	1.13%	488.7	1.01%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-8.801e-01	0.7742	56.0	7.04%	3286.2	6.81%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-8.599e-01	0.7859	8.0	1.01%	434.7	0.90%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-8.541e-01	0.7865	8.0	1.01%	435.0	0.90%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-8.477e-01	0.7876	45.0	5.66%	2641.5	5.47%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-8.372e-01	0.7919	17.0	2.14%	972.0	2.01%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-8.139e-01	0.8065	120.0	15.09%	7177.3	14.87%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-8.051e-01	0.8096	9.0	1.13%	503.6	1.04%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-8.044e-01	0.8096	1.0	0.13%	36.8	0.08%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-7.959e-01	0.8096	163.0	20.50%	9790.4	20.28%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-7.748e-01	0.8222	9.0	1.13%	509.1	1.05%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-7.672e-01	0.8244	75.0	9.43%	4488.6	9.30%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-7.631e-01	0.8244	85.0	10.69%	5095.3	10.55%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-7.454e-01	0.8345	8.0	1.01%	455.3	0.94%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-7.439e-01	0.8345	14.0	1.76%	816.4	1.69%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-7.390e-01	0.8345	33.0	4.15%	1965.0	4.07%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-7.153e-01	0.8477	8.0	1.01%	461.7	0.96%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-6.988e-01	0.8577	23.0	2.89%	1374.5	2.85%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-6.957e-01	0.8577	14.0	1.76%	829.5	1.72%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-6.823e-01	0.8638	7.0	0.88%	407.2	0.84%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-6.716e-01	0.8690	11.0	1.38%	653.6	1.35%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-6.623e-01	0.8730	7.0	0.88%	411.4	0.85%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-6.619e-01	0.8730	60.0	7.55%	3640.1	7.54%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-6.473e-01	0.8781	15.0	1.89%	904.1	1.87%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-6.353e-01	0.8846	53.0	6.67%	3229.5	6.69%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-6.329e-01	0.8846	4.0	0.50%	232.2	0.48%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-6.314e-01	0.8846	8.0	1.01%	479.9	0.99%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-6.305e-01	0.8846	22.0	2.77%	1338.8	2.77%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-6.078e-01	0.8929	36.0	4.53%	2205.3	4.57%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-6.046e-01	0.8929	3.0	0.38%	174.7	0.36%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-6.046e-01	0.8929	3.0	0.38%	174.3	0.36%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-5.960e-01	0.8929	4.0	0.50%	238.7	0.49%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-5.897e-01	0.8930	16.0	2.01%	984.9	2.04%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-5.728e-01	0.9043	5.0	0.63%	305.7	0.63%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-5.662e-01	0.9063	34.0	4.28%	2103.7	4.36%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-5.575e-01	0.9102	7.0	0.88%	434.3	0.90%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-5.294e-01	0.9321	10.0	1.26%	630.0	1.30%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-5.256e-01	0.9321	3.0	0.38%	186.4	0.39%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-5.251e-01	0.9321	29.0	3.65%	1815.0	3.76%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-5.176e-01	0.9321	1.0	0.13%	55.2	0.11%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-5.163e-01	0.9321	2.0	0.25%	122.8	0.25%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-5.151e-01	0.9321	28.0	3.52%	1758.5	3.64%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-5.100e-01	0.9321	6.0	0.75%	382.9	0.79%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-5.085e-01	0.9321	17.0	2.14%	1076.9	2.23%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-5.074e-01	0.9321	8.0	1.01%	510.1	1.06%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-4.950e-01	0.9321	24.0	3.02%	1519.0	3.15%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-4.923e-01	0.9321	83.0	10.44%	5167.2	10.70%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.923e-01	0.9321	14.0	1.76%	894.8	1.85%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-4.894e-01	0.9321	6.0	0.75%	387.3	0.80%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-4.812e-01	0.9321	13.0	1.64%	835.3	1.73%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-4.758e-01	0.9321	8.0	1.01%	519.8	1.08%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-4.736e-01	0.9321	2.0	0.25%	128.8	0.27%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-4.731e-01	0.9321	4.0	0.50%	261.3	0.54%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-4.451e-01	0.9443	11.0	1.38%	721.2	1.49%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-4.432e-01	0.9443	6.0	0.75%	399.6	0.83%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-4.366e-01	0.9447	13.0	1.64%	852.6	1.77%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-4.309e-01	0.9463	20.0	2.52%	1299.6	2.69%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-4.295e-01	0.9463	56.0	7.04%	3552.0	7.36%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-4.246e-01	0.9463	44.0	5.53%	2808.5	5.82%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-4.168e-01	0.9484	10.0	1.26%	667.5	1.38%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-4.114e-01	0.9498	10.0	1.26%	669.4	1.39%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-4.112e-01	0.9498	6.0	0.75%	408.5	0.85%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-4.111e-01	0.9498	1.0	0.13%	66.3	0.14%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-4.041e-01	0.9498	7.0	0.88%	476.8	0.99%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-3.819e-01	0.9630	13.0	1.64%	875.8	1.81%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-3.778e-01	0.9632	50.0	6.29%	3219.6	6.67%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-3.773e-01	0.9632	2.0	0.25%	144.2	0.30%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-3.770e-01	0.9632	84.0	10.57%	5337.3	11.05%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-3.605e-01	0.9688	44.0	5.53%	2857.1	5.92%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-3.579e-01	0.9688	8.0	1.01%	558.0	1.16%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-3.468e-01	0.9748	2.0	0.25%	151.0	0.31%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-3.354e-01	0.9822	26.0	3.27%	1736.7	3.60%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-3.346e-01	0.9822	10.0	1.26%	700.1	1.45%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-3.325e-01	0.9822	2.0	0.25%	153.6	0.32%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-3.234e-01	0.9830	13.0	1.64%	903.9	1.87%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-3.153e-01	0.9872	8.0	1.01%	575.7	1.19%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-3.110e-01	0.9878	6.0	0.75%	441.7	0.91%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-3.086e-01	0.9878	165.0	20.75%	10435.2	21.61%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-3.081e-01	0.9878	13.0	1.64%	911.5	1.89%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-3.031e-01	0.9878	22.0	2.77%	1501.2	3.11%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-2.941e-01	0.9900	31.0	3.90%	2087.0	4.32%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.918e-01	0.9900	11.0	1.38%	787.3	1.63%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-2.917e-01	0.9900	25.0	3.14%	1703.5	3.53%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-2.916e-01	0.9900	22.0	2.77%	1509.0	3.13%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-2.836e-01	0.9900	18.0	2.26%	1254.9	2.60%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-2.815e-01	0.9900	27.0	3.40%	1840.1	3.81%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-2.772e-01	0.9900	2.0	0.25%	166.5	0.34%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-2.707e-01	0.9900	15.0	1.89%	1065.1	2.21%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-2.698e-01	0.9900	32.0	4.03%	2172.4	4.50%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.690e-01	0.9900	77.0	9.69%	5026.5	10.41%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-2.681e-01	0.9900	27.0	3.40%	1852.0	3.84%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-2.663e-01	0.9900	20.0	2.52%	1397.2	2.89%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-2.608e-01	0.9900	8.0	1.01%	600.4	1.24%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.599e-01	0.9900	15.0	1.89%	1072.4	2.22%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.561e-01	0.9900	10.0	1.26%	739.3	1.53%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.487e-01	0.9900	5.0	0.63%	396.8	0.82%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-2.461e-01	0.9900	4.0	0.50%	325.4	0.67%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.457e-01	0.9900	48.0	6.04%	3221.5	6.67%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-2.355e-01	0.9900	12.0	1.51%	887.6	1.84%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-2.327e-01	0.9900	7.0	0.88%	545.3	1.13%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.325e-01	0.9900	3.0	0.38%	256.4	0.53%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-2.300e-01	0.9900	1.0	0.13%	96.5	0.20%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-2.217e-01	0.9900	125.0	15.72%	8104.9	16.79%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-2.189e-01	0.9900	2.0	0.25%	183.8	0.38%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-2.176e-01	0.9900	1.0	0.13%	99.4	0.21%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-2.144e-01	0.9900	9.0	1.13%	695.4	1.44%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-2.136e-01	0.9900	1.0	0.13%	100.4	0.21%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-2.129e-01	0.9900	28.0	3.52%	1967.4	4.07%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-2.035e-01	0.9900	18.0	2.26%	1315.8	2.73%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.636e-01	1.0000	6.0	0.75%	514.2	1.07%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.593e-01	1.0000	21.0	2.64%	1561.7	3.23%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.569e-01	1.0000	5.0	0.63%	444.3	0.92%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.523e-01	1.0000	9.0	1.13%	740.5	1.53%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.511e-01	1.0000	42.0	5.28%	2962.2	6.14%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.506e-01	1.0000	2.0	0.25%	210.4	0.44%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.436e-01	1.0000	1.0	0.13%	122.3	0.25%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.364e-01	1.0000	27.0	3.40%	1994.4	4.13%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.333e-01	1.0000	3.0	0.38%	303.9	0.63%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.210e-01	1.0000	12.0	1.51%	985.5	2.04%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.009e-01	1.0000	27.0	3.40%	2053.7	4.25%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-9.766e-02	1.0000	1.0	0.13%	144.9	0.30%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-9.685e-02	1.0000	74.0	9.31%	5159.2	10.69%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-9.414e-02	1.0000	12.0	1.51%	1020.3	2.11%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-8.919e-02	1.0000	4.0	0.50%	420.0	0.87%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-8.770e-02	1.0000	2.0	0.25%	249.4	0.52%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-7.938e-02	1.0000	1.0	0.13%	156.3	0.32%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-7.873e-02	1.0000	23.0	2.89%	1824.7	3.78%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-7.285e-02	1.0000	1.0	0.13%	161.1	0.33%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-7.217e-02	1.0000	2.0	0.25%	263.2	0.55%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-7.123e-02	1.0000	17.0	2.14%	1419.4	2.94%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-6.191e-02	1.0000	136.0	17.11%	9268.2	19.20%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-6.138e-02	1.0000	11.0	1.38%	1003.6	2.08%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-5.835e-02	1.0000	1.0	0.13%	174.9	0.36%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-5.620e-02	1.0000	60.0	7.55%	4388.1	9.09%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-4.565e-02	1.0000	37.0	4.65%	2889.5	5.98%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-4.339e-02	1.0000	6.0	0.75%	653.7	1.35%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.190e-02	1.0000	159.0	20.00%	10858.0	22.49%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-3.453e-02	1.0000	25.0	3.14%	2103.7	4.36%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-3.284e-02	1.0000	1.0	0.13%	208.9	0.43%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-3.052e-02	1.0000	12.0	1.51%	1166.8	2.42%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-2.274e-02	1.0000	29.0	3.65%	2456.9	5.09%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-2.193e-02	1.0000	12.0	1.51%	1206.1	2.50%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.749e-02	1.0000	19.0	2.39%	1768.2	3.66%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.423e-02	1.0000	11.0	1.38%	1177.2	2.44%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.343e-02	1.0000	14.0	1.76%	1421.8	2.94%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-8.600e-03	1.0000	17.0	2.14%	1709.1	3.54%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-8.077e-03	1.0000	1.0	0.13%	292.3	0.61%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-7.143e-03	1.0000	4.0	0.50%	635.7	1.32%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-2.748e-03	1.0000	44.0	5.53%	3873.1	8.02%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.597e-03	1.0000	74.0	9.31%	6078.0	12.59%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.034e-03	1.0000	52.0	6.54%	4603.7	9.54%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-3.300e-05	1.0000	44.0	5.53%	4494.2	9.31%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-2.000e-06	1.0000	49.0	6.16%	5222.1	10.82%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	79.3	0.16%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	109.7	0.23%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	59.1	0.12%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	50.9	0.11%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	20.2	0.04%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	79.9	0.17%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	151.5	0.31%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	151.5	0.31%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	82.1	0.17%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	0.000e+00	1.0000	0.0	0.00%	164.9	0.34%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	12.1	0.03%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	20.2	0.04%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	48.2	0.10%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	21.4	0.04%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	104.8	0.22%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	18.4	0.04%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	38.4	0.08%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	17.9	0.04%