Information for 8-CAGTCTGACT (Motif 10)

A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T
Reverse Opposite:
G T C A C T A G A C G T A T G C C G T A A C T G G T C A A G T C A G C T C T A G
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.749
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif331.8
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets45.0 +/- 26.5bp
Average Position of motif in Background47.8 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAGTCTGACT
TWGTCTGV--
 A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGTCTGACT
CTGTCTGG--
 A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGTCTGACT--
--TGCTGACTCA
 A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T A C G T A C G T
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGTCTGACT
VBSYGTCTGG--
 A C G T A C G T A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CAGTCTGACT--
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGTCTGACT---
CTGTCTGTCACCT
 A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGTCTGACT---
-TGTCTGDCACCT
 A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGTCTGACT---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAGTCTGACT-
CTTTCANTATGACTV
 A C G T A C G T A C G T A C G T A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAGTCTGACT--
-----TGACTCA
 A G T C T C G A A C T G C A G T A G T C C G A T T A C G C G T A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A