Information for 5-CCACCAGRGGGCR (Motif 5)

G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A
Reverse Opposite:
A G C T A C T G A G T C A G T C G T A C G A C T A G T C A C G T T C A G T A C G G C A T A C T G A C T G
p-value:1e-15
log p-value:-3.560e+01
Information Content per bp:1.706
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif107.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets44.8 +/- 27.5bp
Average Position of motif in Background48.4 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGRGGGCR------
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGRGGGCR---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGRGGGCR----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCACCAGRGGGCR
--AACAGATGGC-
 G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGRGGGCR
NCCCCCCCGGGGGGN
 A C G T A C G T G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGRGGGCR
CCCCCCCGGGGGNN
 A C G T G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCACCAGRGGGCR-----
-NNNAAGGGGGCGGGNNN
 G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGRGGGCR
ACCCCCCCGGGGGGN
 A C G T A C G T G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCACCAGRGGGCR-
TCACCTCTGGGCAG
 G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCACCAGRGGGCR-
CCGCCCAAGGGCAG
 G T A C G T A C C G T A A T G C A G T C G T C A C T A G C T G A C A T G A C T G A C T G G T A C T C G A A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G