Information for 13-CCCTCGGCTG (Motif 15)

A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G
Reverse Opposite:
A T G C G T C A C T A G A G T C T G A C A T C G G T C A A C T G C A T G T C A G
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.834
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif338.4
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets46.5 +/- 29.7bp
Average Position of motif in Background48.1 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCTCGGCTG--
GACCCCCCGCTGTG
 A C G T A C G T A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCTCGGCTG---
GACCCCCCGCTGCGC
 A C G T A C G T A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCTCGGCTG---
GACCCCCCGCTGTGC
 A C G T A C G T A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------CCCTCGGCTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCTCGGCTG--
CCCCCTGCTGTG
 A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCTCGGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTCGGCTG-
-NAHCAGCTGD
 A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCGGCTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCCTCGGCTG
-----NGCTN
 A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CCCTCGGCTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C G T A T G C A C T G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A