Information for 11-AAAAATGACAAAA (Motif 13)

C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A
Reverse Opposite:
G A C T G A C T A C G T A C G T A C T G A C G T A T G C T C G A A C G T A C G T A G C T A C G T A G C T
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets22.0 +/- 9.9bp
Average Position of motif in Background51.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAAATGACAAAA--
AAAAATAACAAACGG
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAAAATGACAAAA
--AAACCACANN-
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAAATGACAAAA
GAAAAAATTGCAAGG
 A C G T A C G T C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAAATGACAAAA-
AACAAACAACAAGAG
 A C G T C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAAAATGACAAAA-
----RNAACAATGG
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAAATGACAAAA---
-CAAACAACAACACCT
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAAAATGACAAAA
--AAACCGCAAA-
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAAATGACAAAA---
ATTTACGACAAATAGC
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAAAATGACAAAA
--AAACCACAGAN
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAAATGACAAAA
-NAAACCACAG--
 C T G A C G T A C T G A G T C A C G T A A C G T A T C G C G T A A G T C C G T A C G T A C G T A C T G A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T