Information for 1-BWAACCACAR (Motif 1)

A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A
Reverse Opposite:
G A C T C G A T A C T G G A C T A C T G A C T G A G C T G A C T C G T A T A C G
p-value:1e-105
log p-value:-2.436e+02
Information Content per bp:1.653
Number of Target Sequences with motif215.0
Percentage of Target Sequences with motif25.69%
Number of Background Sequences with motif1910.9
Percentage of Background Sequences with motif4.01%
Average Position of motif in Targets50.5 +/- 23.6bp
Average Position of motif in Background51.1 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:BWAACCACAR
NAAACCACAG
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:BWAACCACAR--
NWAACCACADNN
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:BWAACCACAR--
-AAACCACAGAN
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.95
Offset:1
Orientation:forward strand
Alignment:BWAACCACAR-
-AAACCACANN
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:BWAACCACAR-
-AAACCACAGC
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.93
Offset:1
Orientation:forward strand
Alignment:BWAACCACAR-
-AAACCGCAAA
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.93
Offset:1
Orientation:forward strand
Alignment:BWAACCACAR
-AAACCGCAA
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:forward strand
Alignment:BWAACCACAR
--ATCCAC--
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:BWAACCACAR--
GCGACCACACTG
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:BWAACCACAR--
GCGACCACCGAA
 A T G C G C A T C T G A T C G A A G T C A G T C C T G A G T A C C G T A C T G A A C G T A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A