Information for 4-AGGTGGCAGCATAGCA (Motif 4)

C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
Reverse Opposite:
A C G T A T C G A G T C C G A T G T C A A C G T A C T G G T A C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T
p-value:1e-18
log p-value:-4.334e+01
Information Content per bp:1.919
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 26.3bp
Average Position of motif in Background51.3 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTGGCAGCATAGCA
AGGTGTCA--------
 C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGTGGCAGCATAGCA-
---TGGCACCATGCCAA
 C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGTGGCAGCATAGCA
GGTTGGCAT-------
 C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------AGGTGGCAGCATAGCA
TGGCCACCAGGTGGCACTNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGGTGGCAGCATAGCA-
---TGGCAGNCTGCCAG
 C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A A C G T
A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGTGGCAGCATAGCA
AGGTGTGA--------
 C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGTGGCAGCATAGCA
CAAGATGGCGGC------
 A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGGCAGCATAGCA
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGCAGCATAGCA
NGTAGGTTGGCATNNN----
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGTGGCAGCATAGCA
AGGTGTGA--------
 C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G G T A C G T C A C A G T C G T A A C T G A T G C G T C A
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T