Information for 5-GGCGGGCAGGCAC (Motif 7)

A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
Reverse Opposite:
A T C G A C G T A T C G G A T C A G T C A C G T A T C G A G T C T A G C T A G C A T C G A T G C T A G C
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.780
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif80.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets46.8 +/- 22.4bp
Average Position of motif in Background49.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCAGGCAC
TNNGGGCAG----
 A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCAGGCAC
GGGCGGGAAGG---
 A C G T A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGCGGGCAGGCAC
--TGCGCAGGCGC
 A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCAGGCAC---
NGTAGGTTGGCATNNN
 A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGCAGGCAC
CWGGCGGGAA-----
 A C G T A C G T A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCGGGCAGGCAC
----GGTTGGCAT
 A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

E2F6/MA0471.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCGGGCAGGCAC
GGGCGGGAAGG---
 A C G T A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCGGGCAGGCAC
AAGGKGRCGCAGGCA-
 A C G T A C G T A C G T A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCGGGCAGGCAC
NGTGGGCAT----
 A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCGGGCAGGCAC
CTGGCAGNCTGCCA-
 A C G T A C G T A T C G A T C G A T G C A C T G A C T G A C T G A T G C T C G A A C T G C T A G A T G C G T C A A T G C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T