Information for 4-CTGCAGAAACAGG (Motif 6)

A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G
Reverse Opposite:
G T A C A G T C C G A T A C T G A C G T G C A T A G C T A T G C A C G T A T C G A T G C C G T A C T A G
p-value:1e-11
log p-value:-2.726e+01
Information Content per bp:1.806
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif77.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets65.1 +/- 23.7bp
Average Position of motif in Background44.6 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGCAGAAACAGG
--CCAGGAACAG-
 A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGAAACAGG----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTGCAGAAACAGG
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGAAACAGG----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGCAGAAACAGG
-TGCTGACTCA--
 A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGCAGAAACAGG---
RAAWNTGCTGASTCAGCANW
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G A C G T A C G T A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTGCAGAAACAGG
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

MAFK/MA0496.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGAAACAGG
AAANTGCTGACTNAG-
 A C G T A C G T A C G T A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGCAGAAACAGG---
-TGCTGAGTCATNNTG
 A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G A C G T A C G T A C G T
A C G T G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGCAGAAACAGG--
NTGCTGAGTCATCCN
 A G T C A C G T A T C G A T G C G T C A A T C G C T G A C G T A T G C A A G T C C G T A C T A G C A T G A C G T A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T