Information for 3-CAGCCACNTGGCTSCC (Motif 5)

A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
Reverse Opposite:
C T A G A T C G A T C G C G T A A C T G A G T C A G T C G T C A C G A T T A C G A C G T A C T G A T C G A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.803
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.9 +/- 18.0bp
Average Position of motif in Background43.5 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGCCACNTGGCTSCC
-GGTCACATGAC----
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGCCACNTGGCTSCC
NTGCCCTTGGGCGN--
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGCCACNTGGCTSCC
-AAGCACATGG-----
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGCCACNTGGCTSCC
--GCCACGTGACC---
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGCCACNTGGCTSCC
--GCCAGCTGBTNB--
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGCCACNTGGCTSCC
-NNCCACGTGG-----
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGCCACNTGGCTSCC
--GCCACGTG------
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGCCACNTGGCTSCC
-NNCCACGTGG-----
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGCCACNTGGCTSCC
--KCCACGTGAC----
 A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCACNTGGCTSCC
BCAGACWA---------
 A C G T A G T C C G T A A C T G A T G C A G T C C G T A A T G C C G T A A C G T A C T G T C A G A G T C A C G T A T G C A T G C G A T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T