Information for 3-CAGCAGTCCYCGT (Motif 4)

A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
Reverse Opposite:
C T G A A T G C A C T G C T G A C T A G A C T G C G T A A G T C A C G T A C T G A G T C C G A T A C T G
p-value:1e-13
log p-value:-3.088e+01
Information Content per bp:1.863
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 18.2bp
Average Position of motif in Background61.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGTCCYCGT
GTCWGCTGTYYCTCT
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGTCCYCGT
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGTCCYCGT
NNGCAGCTGTT-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGCAGTCCYCGT
CAGCTGTT-----
 A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGTCCYCGT
NNGCAGCTGTC-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGTCCYCGT
AGCAGCTGCTNN---
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGCAGTCCYCGT
ACAGCTGTTV----
 A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGCAGTCCYCGT
CAGCTGNT-----
 A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGCAGTCCYCGT
NAHCAGCTGD------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGCAGTCCYCGT
--TCAGTCTT---
 A G T C C G T A A C T G A G T C C G T A A C T G A C G T A G T C A G T C A G C T G T A C A T C G A G C T
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T