Information for 13-GATGCAGCTA (Motif 20)

A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A
Reverse Opposite:
G A C T G T C A A C T G A T G C A C G T A C T G A G T C G T C A C G A T A G T C
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.847
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif116.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets47.8 +/- 27.7bp
Average Position of motif in Background53.1 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GATGCAGCTA---
---GCAGCTGTNN
 A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GATGCAGCTA--
NNAGCAGCTGCT
 A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GATGCAGCTA---
---NCAGCTGCTG
 A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GATGCAGCTA-----
--TGCAGCTGTCCCT
 A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GATGCAGCTA----
AGATGCTRCTRCCHT
 A C G T A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GATGCAGCTA
AGGAAACAGCTG
 A C G T A C G T A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATGCAGCTA--
-NNGCAGCTGTT
 A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GATGCAGCTA--
-NNGCAGCTGTC
 A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATGCAGCTA
MTGATGCAAT--
 A C G T A C G T A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GATGCAGCTA--
--AGCAGCTGCT
 A C T G G C T A A C G T C T A G A G T C C G T A A T C G A G T C C A G T C T G A A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T