Information for 11-GTCTGGAGGC (Motif 17)

A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C
Reverse Opposite:
C A T G G A T C A T G C A C G T T A G C A G T C G T C A T A C G C T G A T G A C
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.684
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif9.34%
Number of Background Sequences with motif2171.1
Percentage of Background Sequences with motif4.50%
Average Position of motif in Targets47.8 +/- 27.3bp
Average Position of motif in Background50.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGAGGC
CTGTCTGG----
 A C G T A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTCTGGAGGC
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGAGGC-
TGTCAGGGGGCG
 A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGGAGGC-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGGAGGC-
TGCCCNGGGGCA
 A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGGAGGC-
TGCCCTNGGGCA
 A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGGAGGC-
TGCCCTNGGGCA
 A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGAGGC
TWGTCTGV----
 A C G T A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGAGGC
GGTCTGGCAT-
 A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGAGGC--
CCGCCCAAGGGCAG
 A C G T A C G T A C T G G A C T A T G C C A G T T C A G A T C G T G C A T A C G C T A G G A T C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G