Information for 6-GTTGTGGTTA (Motif 14)

A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A
Reverse Opposite:
A C G T C T G A T C G A A G T C G T A C T G C A G T A C G T C A C G T A T G A C
p-value:1e-10
log p-value:-2.327e+01
Information Content per bp:1.663
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.09%
Number of Background Sequences with motif1333.5
Percentage of Background Sequences with motif2.76%
Average Position of motif in Targets50.1 +/- 24.9bp
Average Position of motif in Background51.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GTTGTGGTTA
GCTGTGGTTT
 A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GTTGTGGTTA
NNTGTGGTTT
 A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GTTGTGGTTA-
-CTGTGGTTTN
 A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GTTGTGGTTA-
NNHTGTGGTTWN
 A C G T A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GTTGTGGTTA
-TTGCGGTTT
 A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GTTGTGGTTA
GTCTGTGGTTT
 A C G T A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GTTGTGGTTA
TTTGCGGTTT
 A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GTTGTGGTTA-
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTTGTGGTTA-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTGGTTA---
GTNTTGTTGTGANNT
 A C G T A C G T A C T G G C A T A C G T C A T G A C G T C A T G T C A G A G C T G A C T T G C A A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T