Information for 1-AMAGGAAGYN (Motif 1)

C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
Reverse Opposite:
A G T C T C G A A G T C G A C T A G C T T A G C G A T C A C G T A C T G G C A T
p-value:1e-35
log p-value:-8.129e+01
Information Content per bp:1.545
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif16.08%
Number of Background Sequences with motif2240.4
Percentage of Background Sequences with motif4.64%
Average Position of motif in Targets46.8 +/- 25.7bp
Average Position of motif in Background49.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:AMAGGAAGYN
ACAGGAAGTG
 C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-AMAGGAAGYN-
NDCAGGAARTNN
 A C G T C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AMAGGAAGYN
AVCAGGAAGT-
 A C G T C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:AMAGGAAGYN
ACAGGAAGTG
 C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:5
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AMAGGAAGYN
AACCGGAAGT-
 A C G T C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AMAGGAAGYN
ANCAGGAAGT-
 A C G T C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AMAGGAAGYN
NACCGGAAGT-
 A C G T C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AMAGGAAGYN
AACAGGAAGT-
 A C G T C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AMAGGAAGYN
ACCGGAAG--
 C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AMAGGAAGYN
NACAGGAAAT-
 A C G T C G T A T G A C T G C A C T A G A T C G T C G A C T G A T C A G A G C T T C A G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T