Information for 2-YTTGTGGTTW (Motif 2)

A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A
Reverse Opposite:
G C A T C T G A C T G A A G T C A G T C C G T A T A G C C T G A T C G A T C G A
p-value:1e-48
log p-value:-1.109e+02
Information Content per bp:1.666
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif16.92%
Number of Background Sequences with motif1860.3
Percentage of Background Sequences with motif3.87%
Average Position of motif in Targets48.1 +/- 25.2bp
Average Position of motif in Background49.8 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-YTTGTGGTTW-
NNHTGTGGTTWN
 A C G T A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:YTTGTGGTTW-
-CTGTGGTTTN
 A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:YTTGTGGTTW
NNTGTGGTTT
 A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-YTTGTGGTTW
GTCTGTGGTTT
 A C G T A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:YTTGTGGTTW
GCTGTGGTTT
 A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:YTTGTGGTTW
TTTGCGGTTT
 A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:YTTGTGGTTW
-TTGCGGTTT
 A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:YTTGTGGTTW
---GTGGAT-
 A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-YTTGTGGTTW-
NTCGGTGGTCGC
 A C G T A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-YTTGTGGTTW-
CAGTGTGGTCGC
 A C G T A G C T A G C T G A C T A T C G C G A T A C T G A C T G A G C T G A C T C G T A A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C