Information for 12-MAGGYARCCGMCC (Motif 13)

G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C A C T G A C T G A G T C A C G T C T A G A G T C A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 27.0bp
Average Position of motif in Background42.2 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:MAGGYARCCGMCC
----YAACBGCC-
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MAGGYARCCGMCC-----
-AAGCATACGCCCAACTT
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:MAGGYARCCGMCC-
NAGGTCANTGACCT
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:MAGGYARCCGMCC
---NHAACBGYYV
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:MAGGYARCCGMCC
---CCAACTGCCA
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----MAGGYARCCGMCC
NNNTTAGGTAGCNTNT-
 A C G T A C G T A C G T A C G T G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:MAGGYARCCGMCC
---GGTCCCGCCC
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:MAGGYARCCGMCC------
---ATCCCCGCCCCTAAAA
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:MAGGYARCCGMCC--
-TGGCAGNCTGCCAG
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:MAGGYARCCGMCC-------
---GGTCCCGCCCCCTTCTC
 G T C A C G T A C T A G A C T G A G T C C G T A C T A G A G T C G T A C A C T G G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C