Information for 9-CCTCTGCGCGGCT (Motif 11)

A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A T G C A T C G A G T C A C T G A G T C C G T A A C T G C G T A A T C G A C T G
p-value:1e-10
log p-value:-2.506e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 27.6bp
Average Position of motif in Background15.9 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTGCGCGGCT
NNGCNCTGCGCGGC-
 A C G T A C G T A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTCTGCGCGGCT
GCGCCTGCGCA---
 A C G T A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCTCTGCGCGGCT------
----GGNGCGNCTGTTNNN
 A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CCTCTGCGCGGCT-
---------NGCTN
 A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCGCGGCT
VBSYGTCTGG------
 A C G T A C G T A C G T A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCTCTGCGCGGCT
CAACGTCCGCGG----
 A C G T A C G T A C G T A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCTCTGCGCGGCT----
--NTCGCGCGCCTTNNN
 A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCTCTGCGCGGCT
DCTCAGCAGG---
 A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CCTCTGCGCGGCT---
------CGCAGCTGCG
 A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTGCGCGGCT
GCGCATGCGCAG--
 A C G T A G T C A T G C A C G T A G T C C G A T A C T G A G T C A C T G A T G C A T C G A C T G A G T C A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T