Information for 8-CAGGMCGCAK (Motif 4)

T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
Reverse Opposite:
G T C A A C G T T A C G G A T C C A T G C A T G A G T C T G A C G C A T A C T G
p-value:1e-15
log p-value:-3.479e+01
Information Content per bp:1.475
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif11.54%
Number of Background Sequences with motif2141.4
Percentage of Background Sequences with motif4.57%
Average Position of motif in Targets54.2 +/- 25.6bp
Average Position of motif in Background50.3 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGGMCGCAK
CACAGN------
 A C G T A C G T T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGMCGCAK---
-AGGAAACAGCTG
 T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T A C G T A C G T A C G T
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGMCGCAK
ACAGGAAGTG-
 A C G T T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGGMCGCAK----
CAGGCCNNGGCCNN
 T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGMCGCAK
ANCAGGATGT--
 A C G T A C G T T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGMCGCAK
AACAGGAAGT--
 A C G T A C G T T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGMCGCAK
NDCAGGAARTNN
 A C G T A C G T T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGGMCGCAK
AAGGTCAC--
 T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGGMCGCAK
CTAGGCCT---
 A C G T T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGGMCGCAK
NACAGGAAAT--
 A C G T A C G T T G A C C G T A A C T G T C A G G T A C G T A C C T A G A T G C T G C A C A G T
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T