Information for 16-YCACACAGAGCCY (Motif 21)

A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A G T C A C G T A G T C A C G T A C T G A G C T A C T G A C G T A C T G C T A G
p-value:1e-4
log p-value:-9.878e+00
Information Content per bp:1.920
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 28.1bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YCACACAGAGCCY-
--ACAAAGGNBCCT
 A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:YCACACAGAGCCY
---CACAGN----
 A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-YCACACAGAGCCY
GCCGCGCAGTGCGT
 A C G T A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YCACACAGAGCCY
--ACAAAG-----
 A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:YCACACAGAGCCY
-------CAGCC-
 A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:YCACACAGAGCCY
CCAGACAG-----
 A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:YCACACAGAGCCY
-----CGGAGC--
 A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:YCACACAGAGCCY
-CACGCA------
 A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----YCACACAGAGCCY
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----YCACACAGAGCCY--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A T A G C C T G A A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G C T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G