Information for 18-TGCGGCTGCAGCC (Motif 20)

C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A C T G A T G C C G T A A T C G A G T C G T A C A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.716e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 27.8bp
Average Position of motif in Background42.4 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCGGCTGCAGCC--
AGATGCTRCTRCCHT
 C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCGGCTGCAGCC
-GRTGMTRGAGCC
 C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCGGCTGCAGCC
CATGCGGGTAC----
 A C G T A C G T C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCGGCTGCAGCC
AGCAGCTGCTNN-
 C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TGCGGCTGCAGCC
--------CAGCC
 C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGCGGCTGCAGCC
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGCTGCAGCC
CAGCAGCTGN----
 A C G T C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCGGCTGCAGCC-
AAGGKGRCGCAGGCA
 A C G T C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCGGCTGCAGCC
TATGCGGGTA-----
 A C G T A C G T C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCGGCTGCAGCC
CGCAGCTGCG---
 C G A T A C T G A G T C A C T G A C T G A T G C A C G T A T C G G T A C C G T A A C T G A G T C A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T