Information for 16-CCACACAGAGCCT (Motif 17)

A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
Reverse Opposite:
G T C A A C T G A C T G A G T C C G A T A T G C A C G T T A C G A G C T A C T G A C G T C T A G T C A G
p-value:1e-9
log p-value:-2.159e+01
Information Content per bp:1.781
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.4 +/- 24.7bp
Average Position of motif in Background42.2 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CCACACAGAGCCT
-------CAGCC-
 A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCACACAGAGCCT
-----CGGAGC--
 A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCACACAGAGCCT
CCAGACAG-----
 A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCACACAGAGCCT
----AGCGCGCC-
 A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCACACAGAGCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCACACAGAGCCT
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCACACAGAGCCT
CCAGACRSVB---
 A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCACACAGAGCCT
GCCACACCCA----
 A C G T A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCACACAGAGCCT
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCACACAGAGCCT
GGCCACACCCAN---
 A C G T A C G T A G T C A G T C C G T A A G T C C T G A A T G C C G T A A T C G C G T A A C T G G T A C A G T C A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T