Information for 10-CAGCTGGCCT (Motif 13)

T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
Reverse Opposite:
T G C A C T A G T A C G A T G C G T A C G T C A A C T G G T A C C A G T A C T G
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.486
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.90%
Number of Background Sequences with motif654.2
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets43.8 +/- 25.2bp
Average Position of motif in Background50.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGCCT
ANCAGCTG----
 A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGGCCT
NAHCAGCTGD---
 A C G T A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGGCCT
NVCAGCTGBBNN
 A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGGCCT
CAGCAGCTGN---
 A C G T A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGGCCT
NAACAGCTGG---
 A C G T A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGGCCT
GCCAGCTGBTNB
 A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGGCCT
GCAGCTGTNN-
 A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGGCCT
NNGCAGCTGTC--
 A C G T A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGCCT
AACAGCTG----
 A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----CAGCTGGCCT
NNAGCAGCTGCT--
 A C G T A C G T A C G T A C G T T G A C G T C A C A T G T G A C C A G T C A T G T A C G A T G C G A T C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T