Information for 9-CCACABGGACTCT (Motif 8)

A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
Reverse Opposite:
C G T A A T C G C G T A A T C G C G A T G T A C A G T C T A G C A C G T A C T G A G C T A C T G A C T G
p-value:1e-13
log p-value:-3.050e+01
Information Content per bp:1.865
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.6 +/- 24.2bp
Average Position of motif in Background48.7 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCACABGGACTCT
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCACABGGACTCT
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACABGGACTCT
AAACCACAGC------
 A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCACABGGACTCT
AAGCACATGG-----
 A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCACABGGACTCT
NAAACCACAG-------
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACABGGACTCT
ATCCAC---------
 A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCACABGGACTCT
AAACCACANN------
 A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCACABGGACTCT-
--ACAAAGGNBCCT
 A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCACABGGACTCT
--ACAAAG-----
 A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCACABGGACTCT
NNCCACGTGG-----
 A C G T A C G T A G T C A G T C C T G A A G T C C G T A A C T G C T A G A C T G C G T A A T G C A C G T A T G C C G A T
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T