Information for 9-TGGGCATCTGCCATCT (Motif 12)

C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
Reverse Opposite:
C G T A C A T G T C G A G C A T C T A G T A C G T A G C G T C A T C A G T C G A C G A T C A T G T A G C G A T C A G T C G C T A
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.544
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.4 +/- 32.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCATCTGCCATCT
TTGGCATGGTGCCA---
 A C G T C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGGCATCTGCCATCT
-SNGCACCTGCHS---
 C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGGCATCTGCCATCT
CTGGCAGNCTGCCA---
 A C G T C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGGCATCTGCCATCT
--NVCAGCTGBBNN--
 C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGGGCATCTGCCATCT
--GCCAGCTGBTNB--
 C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGGCATCTGCCATCT
CCNNACCATCTGGCCTN-
 A C G T A C G T C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGGCATCTGCCATCT
-TGGCACGTGCCA---
 C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGCATCTGCCATCT
NNNNTTGGGCACNNCN-----
 A C G T A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGGCATCTGCCATCT
--GCCATCTGTT----
 C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGGGCATCTGCCATCT--
------GCNGCCATCTTG
 C G A T T C A G C T A G A T C G G T A C G C T A A G C T A G T C A C G T A C T G A T G C G A T C C G T A A G C T G T A C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G