Information for 5-ATGVGGCCTBCCATGV (Motif 7)

C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
Reverse Opposite:
A T C G A G T C G C T A A C G T A C T G A C T G T G A C C G T A A C T G A T C G A G T C A G T C A G T C A G T C C G T A A G C T
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.784
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 12.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATGVGGCCTBCCATGV
TATGCGGGTA-------
 A C G T C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----ATGVGGCCTBCCATGV
NNNNATGCGGGTNNNN----
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATGVGGCCTBCCATGV-
--SCAGYCADGCATGAC
 C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ATGVGGCCTBCCATGV
ATGACGTCATCN----
 C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:ATGVGGCCTBCCATGV
-TGGGGCCCAC-----
 C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ATGVGGCCTBCCATGV
-NGGGGATTTCCC---
 C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATGVGGCCTBCCATGV
CATGCGGGTAC------
 A C G T C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:ATGVGGCCTBCCATGV--
--------TGCCCAGNHW
 C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:ATGVGGCCTBCCATGV
--GGGGATTTCC----
 C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----ATGVGGCCTBCCATGV
NNNATTGGGGGTNTCCT---
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G T A C G C T A G A C T G A T G C A G T C C G A T A C G T A G T C A G T C G T C A C G A T A C T G T A G C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T A C G T A C G T