Information for 7-GAACGAAGCA (Motif 18)

A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C G T G T A C A T C G C G A T A C G T A G T C
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.848
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif91.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets50.2 +/- 31.0bp
Average Position of motif in Background52.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GAACGAAGCA
GGAACAAAGR-
 A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAACGAAGCA---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAACGAAGCA---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GAACGAAGCA
---NGAAGC-
 A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAACGAAGCA
VRRACAAWGG-
 A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAACGAAGCA
AAAACAAAGG-
 A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GAACGAAGCA---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAACGAAGCA---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAACGAAGCA----
--AGGAAACAGCTG
 A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAACGAAGCA---
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A T A G C C A T G G T C A C G T A A C T G G T A C T C G A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A