Information for 3-CGCGGCTTTTTCCCCC (Motif 12)

A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
Reverse Opposite:
A C T G A T C G A C T G A C T G A C T G C T G A C G T A C G T A G T C A C G T A A T C G A G T C G T A C A C T G T A G C A C T G
p-value:1e-11
log p-value:-2.649e+01
Information Content per bp:1.826
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 27.2bp
Average Position of motif in Background33.8 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCGGCTTTTTCCCCC
---GGGGATTTCC---
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCGGCTTTTTCCCCC
---GGGAATTTCC---
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CGCGGCTTTTTCCCCC
-------TTTTCCA--
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGCGGCTTTTTCCCCC
---GGGGATTTCC---
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTTTTTCCCCC
---GGGAATTTCC---
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CGCGGCTTTTTCCCCC--
------VDTTTCCCGCCA
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGCGGCTTTTTCCCCC
-----CTGTTTAC---
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CGCGGCTTTTTCCCCC-
-------NYTTCCCGCC
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCGGCTTTTTCCCCC
--NGGGGATTTCCC--
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CGCGGCTTTTTCCCCC-
-------DTTTCCCGCC
 A G T C A T C G A G T C A C T G A C T G A T G C C G A T A C G T A C G T A C G T A G C T T G A C A G T C A G T C A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C